[Gmod-help] Re: [Gmod-gbrowse] Invoking GBrowse URLs

[Bingbing Yuan]

Hi Dave,
We have the old version (1.52). Thanks a lot for the information. We are going to update our Grbowse.
Bingbing


----- Original Message -----
From: "Dave Clements, GMOD Help Desk" <help at gmod.org>
To: "Bingbing Yuan" <byuan at wi.mit.edu>
Cc: gmod-gbrowse at lists.sourceforge.net
Sent: Friday, February 5, 2010 7:36:08 PM
Subject: Re: [Gmod-gbrowse] Invoking GBrowse URLs

Hi Bingbing,

The URL below looks good.  What version of GBrowse are you using?  The
style functionality works on the version at WormBase (very recent),
but not on the version at Flybase (1.68).  Unfortunately, I don't know
when this was added/fixed.

Dave C.

On Tue, Feb 2, 2010 at 8:15 AM, Bingbing Yuan <byuan at wi.mit.edu> wrote:
> Dear Sir/Madam,
> I'm using 'add' to add a feature to the track according to the gmod website (http://gmod.org/wiki/GBrowse_Configuration_HOWTO#Configuration_File_layout), and it works fine. But I can not set its feature style with 'style'. Here is my sample URL:
> gbrowse.cgi?ref=contig7;start=510257;stop=511930;add=contig7+alignment+query_on_contig7+510257..511257,511930..511700;style=alignment+glyph=arrow
>
> Did I miss something?
>
> Thanks,
> Bingbing
>
>
>
>
> --
> Bingbing Yuan M.D. Ph.D.
> Bioinformatics Scientist
> Whitehead Institute for Biomedical Research
> tel: 617 258 6109
> byuan at wi.mit.edu
>
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-- 
Bingbing Yuan M.D. Ph.D.
Bioinformatics Scientist
Whitehead Institute for Biomedical Research
tel: 617 258 6109
byuan at wi.mit.edu