[Gmod-help] Presentation suggestion GMOD Europe 2010

Henning Hermjakob hhe at ebi.ac.uk
Fri Aug 6 07:17:18 EDT 2010


Dear GMOD team,

great to see that the meeting will be in Cambridge! If you are 
interested, I'd like to propose a presentation on PSICQUIC, the PSI 
Common Query Interface. PSICQUIC is an API to access molecular 
interactions in a simple format, currently supported by

Apid, BioGrid, ChEMBL, DIP, InnateDB, IntAct, iRefIndex, MatrixDB, MINT, 
MPIDB, Reactome, and STRING. Currently, 14 Million binary interactions 
(redundant) are available through PSICQUIC.

For a simple client, please see
http://www.ebi.ac.uk/Tools/webservices/psicquic/view

For documentation, please see
http://code.google.com/p/psicquic/

For GMOD, this might be an efficient way to access/disseminate molecular 
interactions. I attach a mini-presentation, slightly outdated, but 
should give an impression.

Unfortunately I'll be travelling at the time, but Sandra Orchard (for a 
more biologist view) or Bruno Aranda (for a more technical view) should 
be available.

-- 

Best regards,

Henning

-----------------------------------------------------------------------
Henning Hermjakob
Team Leader Proteomics Services         Email:            hhe at ebi.ac.uk
European Bioinformatics Institute       Tel:          + 44 1223 49 4671
Wellcome Trust Genome Campus            Fax:          + 44 1223 49 4468
Hinxton, Cambridge CB10 1SD		Http://www.ebi.ac.uk/proteomics
United Kingdom

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