[Gmod-help] Presentation suggestion GMOD Europe 2010
Henning Hermjakob
hhe at ebi.ac.uk
Fri Aug 6 07:17:18 EDT 2010
Dear GMOD team,
great to see that the meeting will be in Cambridge! If you are
interested, I'd like to propose a presentation on PSICQUIC, the PSI
Common Query Interface. PSICQUIC is an API to access molecular
interactions in a simple format, currently supported by
Apid, BioGrid, ChEMBL, DIP, InnateDB, IntAct, iRefIndex, MatrixDB, MINT,
MPIDB, Reactome, and STRING. Currently, 14 Million binary interactions
(redundant) are available through PSICQUIC.
For a simple client, please see
http://www.ebi.ac.uk/Tools/webservices/psicquic/view
For documentation, please see
http://code.google.com/p/psicquic/
For GMOD, this might be an efficient way to access/disseminate molecular
interactions. I attach a mini-presentation, slightly outdated, but
should give an impression.
Unfortunately I'll be travelling at the time, but Sandra Orchard (for a
more biologist view) or Bruno Aranda (for a more technical view) should
be available.
--
Best regards,
Henning
-----------------------------------------------------------------------
Henning Hermjakob
Team Leader Proteomics Services Email: hhe at ebi.ac.uk
European Bioinformatics Institute Tel: + 44 1223 49 4671
Wellcome Trust Genome Campus Fax: + 44 1223 49 4468
Hinxton, Cambridge CB10 1SD Http://www.ebi.ac.uk/proteomics
United Kingdom
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