[Gmod-help] Re: [Gmod-gbrowse] Gbrowse2.03 Customization Settings

donghe at caltech.edu donghe at caltech.edu
Thu Apr 15 12:43:25 EDT 2010


Hi Dave,

the bug is fixed after one DIV is removed.

thanks!

Have a great day!

Dong

> Hi Dong,
>
> I don't see any problems with the HTML.  There are a lot of unclosed DIVs,
> but I presume they are closed in the footer.  The only thing I can suggest
> is to add the header a few lines at a time until it breaks something, and
> then focus on the newly added lines.
>
> Dave C
>
>
>
> On Fri, Apr 9, 2010 at 10:51 AM, <donghe at caltech.edu> wrote:
>
>> Hi Dave,
>>
>> I tried the default Gbrowse.conf file with adding the header in order to
>> integrate Gbrowse2.0 in our website. without header, everything works
>> very
>> well, fully functional. here is the header I added:
>>
>>
>> --------------------------------------------------------------------------
>> # Various places where you can insert your own HTML -- see configuration
>> docs
>>
>> header =
>>        <link rel="stylesheet" href="/SpBase/2col_leftNav_gb.css"
>> type="text/css">
>>        <div id="containerOuter">
>>        <div id="containerOuterTop"></div>
>>        <div id="containerOuterMain">
>>
>>        <div id="container">
>>        <div id="container2">
>>        <div id="masthead">
>>        </div>
>>        <div id="navcontainer">
>>                <ul id="navlist">
>>                <li><a
>> href="http://mandolin1.caltech.edu/SpBase/index.php">Home</a></li>
>>                <li><a
>> href="http://mandolin1.caltech.edu/SpBase/wwwblast/blast.php
>> ">Blast</a></li>
>>                <li><a
>> href="http://mandolin1.caltech.edu/cgi-bin/gbrowse/chado0.5/
>> ">GBrowse V0.5</a></li>
>>                <li><a
>> href="http://mandolin1.caltech.edu/cgi-bin/gb2/gbrowse/chado2.5/
>> ">GBrowse V2.5</a></li>
>>               <li><a
>> href="http://mandolin1.caltech.edu/SpBase/biomart">Biomart</a></li>
>>                <li><a
>> href="http://mandolin1.caltech.edu/SpBase/resources/index.php
>> ">Resources</a></li>
>>                <li><a
>> href="http://mandolin1.caltech.edu/SpBase/downloads.php
>> ">Downloads</a></li>
>>                <li><a
>> href="http://mandolin1.caltech.edu/SpBase/phpBB3">Community</a></li>
>>                <li><a
>> href="http://mandolin1.caltech.edu/SpBase/sitemap">Site
>> Map</a></li>
>>                </ul>
>>        </div>
>>
>>        <BR><BR>
>>        <P>
>>        <h2 id="pageName"><FONT color=BLUE>Sea urchin GBrowse (assembly
>> 2.5) </FONT></h2>
>>        <BR>
>>
>> -------------------------------------------------------------------
>>
>> thanks for your help
>>
>> Dong
>>
>>
>> > Hi Dong,
>> >
>> > Can you post the relevant parts of your conf file to the list?
>> >
>> > Thanks,
>> >
>> > Dave C
>> >
>> > On Thu, Apr 8, 2010 at 5:22 PM, <donghe at caltech.edu> wrote:
>> >
>> >> Hi,
>> >>
>> >> I have a problem to integrate Gbrowse2.03 into the web page on my own
>> >> website, after I put header HTML into "header =" , the popup balloon
>> and
>> >> genomic coordinate navigate bar functions are disable! does anybody
>> know
>> >> what's wrong with it? and give me any suggestion to solve this
>> problem?
>> >>
>> >> Thanks
>> >>
>> >> Dong
>> >>
>> >>
>> >>
>> >>
>> ------------------------------------------------------------------------------
>> >> Download Intel&#174; Parallel Studio Eval
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>> >> _______________________________________________
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>> >> Gmod-gbrowse at lists.sourceforge.net
>> >> https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse
>> >>
>> >
>> >
>> >
>> > --
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>>
>>
>>
>>
>> ------------------------------------------------------------------------------
>> Download Intel&#174; Parallel Studio Eval
>> Try the new software tools for yourself. Speed compiling, find bugs
>> proactively, and fine-tune applications for parallel performance.
>> See why Intel Parallel Studio got high marks during beta.
>> http://p.sf.net/sfu/intel-sw-dev
>> _______________________________________________
>> Gmod-gbrowse mailing list
>> Gmod-gbrowse at lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse
>>
>
>
>
> --
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