[Gmod-help] Re: [Gmod-gbrowse] Gbrowse2.03 Customization Settings

donghe at caltech.edu donghe at caltech.edu
Fri Apr 9 13:51:27 EDT 2010


Hi Dave,

I tried the default Gbrowse.conf file with adding the header in order to
integrate Gbrowse2.0 in our website. without header, everything works very
well, fully functional. here is the header I added:


--------------------------------------------------------------------------
# Various places where you can insert your own HTML -- see configuration docs

header =
        <link rel="stylesheet" href="/SpBase/2col_leftNav_gb.css"
type="text/css">
        <div id="containerOuter">
        <div id="containerOuterTop"></div>
        <div id="containerOuterMain">

        <div id="container">
        <div id="container2">
        <div id="masthead">
        </div>
        <div id="navcontainer">
                <ul id="navlist">
                <li><a
href="http://mandolin1.caltech.edu/SpBase/index.php">Home</a></li>
                <li><a
href="http://mandolin1.caltech.edu/SpBase/wwwblast/blast.php">Blast</a></li>
                <li><a
href="http://mandolin1.caltech.edu/cgi-bin/gbrowse/chado0.5/
">GBrowse V0.5</a></li>
                <li><a
href="http://mandolin1.caltech.edu/cgi-bin/gb2/gbrowse/chado2.5/
">GBrowse V2.5</a></li>
               <li><a
href="http://mandolin1.caltech.edu/SpBase/biomart">Biomart</a></li>
                <li><a
href="http://mandolin1.caltech.edu/SpBase/resources/index.php">Resources</a></li>
                <li><a
href="http://mandolin1.caltech.edu/SpBase/downloads.php">Downloads</a></li>
                <li><a
href="http://mandolin1.caltech.edu/SpBase/phpBB3">Community</a></li>
                <li><a
href="http://mandolin1.caltech.edu/SpBase/sitemap">Site
Map</a></li>
                </ul>
        </div>

        <BR><BR>
        <P>
        <h2 id="pageName"><FONT color=BLUE>Sea urchin GBrowse (assembly
2.5) </FONT></h2>
        <BR>

-------------------------------------------------------------------

thanks for your help

Dong


> Hi Dong,
>
> Can you post the relevant parts of your conf file to the list?
>
> Thanks,
>
> Dave C
>
> On Thu, Apr 8, 2010 at 5:22 PM, <donghe at caltech.edu> wrote:
>
>> Hi,
>>
>> I have a problem to integrate Gbrowse2.03 into the web page on my own
>> website, after I put header HTML into "header =" , the popup balloon and
>> genomic coordinate navigate bar functions are disable! does anybody know
>> what's wrong with it? and give me any suggestion to solve this problem?
>>
>> Thanks
>>
>> Dong
>>
>>
>>
>> ------------------------------------------------------------------------------
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>
>
>
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