[Gmod-help] Re: [Gmod-gbrowse] gbrowse v2 and blast graphics tool

Shuai Weng shuai at genome.stanford.edu
Fri Sep 18 13:53:53 EDT 2009


Hi Dave,

Sorry, I didn't get chance to do anything with BLAST Graphic Viewer 
recently.

Shuai

On Fri, 18 Sep 2009, Dave Clements, GMOD Help Desk wrote:

> Hi Shuai,
>
> Has there been any work done to test the BLAST Graphic Viewer with GBrowse 2?
>
> Thanks,
>
> Dave C.
>
> On Thu, Sep 17, 2009 at 10:20 AM, Alessandra
> <alessandra.bilardi at gmail.com> wrote:
>> Hi all,
>>
>> I'm testing blast graphics 0.02 tool with gbrowse v2.
>> so that I discovered that old paths didn't work with gbrowse v2.
>> this is an example that with gbrowse v1.68 worked:
>>
>> http://gbrowse.cribi.unipd.it/public/gbrowse/vitis_vinifera_8x/?ref=chr15_random;start=1592829;stop=1596888;add=chr15_random%20BLASTN%20HSP4%201594829..1594888;h_region=chr15_random:1594829..1594888;
>>
>> Can you help me about it?
>>
>> Alessandra.
>>
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>
>
>
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