[Gmod-help] Re: [apollo] Who is using the Apollo?

[cwilks]

We (TAIR) also use Apollo heavily for our genome annotation efforts, despite 
the fact that our version has been branched (by us) and is significantly 
behind the main code base.

Chris
----- Original Message ----- 
From: "Ed Lee" <elee at berkeleybop.org>
To: "Scott Cain" <scott at scottcain.net>
Cc: <apollo at fruitfly.org>; "Dave Clements, GMOD Help Desk" <help at gmod.org>
Sent: Friday, October 02, 2009 12:11 PM
Subject: Re: [apollo] Who is using the Apollo?


> Hi Daniel,
>
> We did an informal survey of the user base about a year ago and to
> add Scott's list:
>
> * Howard Hughes Medical Institute SEA
> * UGA
> * Nasonia
> * VectorBase
> * Ensembl GeneBuild
> * Hamilton College
>
> There are some other groups that have shown interest in starting to
> use Apollo, although I'm not sure whether or not they have done so.
>
> Cheers,
> Ed
>
> On Fri, 2 Oct 2009, Scott Cain wrote:
>
>> Hi Daniel,
>>
>> At a GMOD meeting a few years ago, the participants came up with a list 
>> of
>> groups that we knew of that were using Apollo with Chado (there are 
>> probably
>> other users, but we weren't interested in the for that list).  The ones 
>> we
>> came up with are here:
>>
>> http://gmod.org/wiki/Apollo#Users
>>
>> Scott
>>
>> On Oct 2, 2009, at 3:19 PM, Dave Clements, GMOD Help Desk wrote:
>>
>>> Hi Daniel,
>>>
>>> As far as I know, there is not a list of Apollo users anywhere.
>>> People don't have to register to download and use it.  Creating a list
>>> of GMOD users and what components they use is on my todo list, but I
>>> don't know when I'll get to it.
>>>
>>> In the meantime, the best way to find out who is using it, may be to
>>> look at the archives for this list.  Go to
>>> http://mail.fruitfly.org/mailman/private/apollo/.  You'll need your
>>> email address and list password (which was mailed to you when you
>>> joined the list.).
>>>
>>> Dave C.
>>>
>>> On Fri, Oct 2, 2009 at 6:50 AM, Daniel Xavier de Sousa
>>> <danielucg at yahoo.com.br> wrote:
>>>> Hello,
>>>>
>>>> I`m quite new here, and a would like to know who is using the Apollo 
>>>> now?
>>>>
>>>> I`m looking for a web system to run a medium genome project. I hope to
>>>> process the pipeline: calling sequences, cleaning the vector, 
>>>> clustering
>>>> and
>>>> annotation.
>>>>
>>>> Thanks for all,
>>>>
>>>>
>>>> -Daniel Xavier de Sousa
>>>>
>>>> ________________________________
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>>>>
>>>>
>>>
>>>
>>>
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>>
>> -----------------------------------------------------------------------
>> Scott Cain, Ph. D. scott at scottcain dot net
>> GMOD Coordinator (http://gmod.org/) 216-392-3087
>> Ontario Institute for Cancer Research
>>
>>
>>
>>
>> _______________________________________________
>> apollo mailing list
>> apollo at fruitfly.org
>> http://mail.fruitfly.org/mailman/listinfo/apollo
>>


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