[Gmod-help] general questions about data querying

Ryan Golhar golharam at umdnj.edu
Wed Nov 11 15:42:33 EST 2009


Hi,

I recently installed Gbrowse to view some data I have, but now I'm 
interested in performing a more thorough analysis of the data.  I want 
to identify certain regions of the genome that contain overlapping genes 
  on the plus/minus strand ie one gene on the plus strand and a 2nd gene 
on the minus strand overlapping the 1st gene.

I can see one or two of these occurrences in GBrowse, but I don't want 
to do this manually.  Is there a way to query the database to find all 
occurrences of these?

Ryan



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