[Gmod-help] contigs to reference sequence

[Denis O'Meally]

Hi,

I've recently setup a local gbrowser for the wallaby genome project and 
have a demo system up and running with the tutorials and a few of our 
own wallaby annotations. One thing that I' uncertain about is how to 
store a reference sequence for a chromosome thats composed of multiple 
contigs (we have an integrated physical and linkage map, so can place 
the contigs on chromosomes). I'm currently just using the memory adaptor 
(but will use mysql) with Bio::DB::SeqFeature::Store. Any advice you can 
provide, or tutorial you can direct me to would be very much appreciated.
Cheers,
Denis

-- 
Denis O'Meally
Comparative Genomics Group
Research School of Biological Sciences
The Australian National University
GPO Box 475, Canberra, ACT 2601
  Tel: +61 2 6125 2371
Email: denis.omeally at anu.edu.au