[Gmod-help] Gbrowse & Multiple Organisms in Chado

[Scott Cain]

Hi Todd,

I thought I'd already emailed you about this, but I can't find the
email now; traveling has obviously taken it's toll on me :-)

I committed a fix for this a few days ago.  If you'd like to use it,
get a checkout of the stable branch of the gbrowse cvs repository.
Information on getting an anonymous check out is at
http://www.gmod.org/wiki/index.php/CVS_Access

Scott


On Wed, Jul 16, 2008 at 2:05 PM, Scott Cain <cain.cshl at gmail.com> wrote:
> Hi Todd,
>
> I really, really thought I'd implemented this already, but I can't
> find it now.  Of course, now I"m left wondering if I did implement it
> and forgot to commit it or I just thought about it so much that I
> eventually thought I had :-/
>
> Anyway, I'll work on it tonight and get it committed to the GBrowse
> repository tonight.
>
> Scott
>
>
> On Tue, Jul 15, 2008 at 3:32 PM,  <todd.moughamer at syngenta.com> wrote:
>> We have Chado installed and have loaded data from multiple organisms into
>> it. We have implemented Gbrowse on top of it and it works fine but it all
>> the organisms are available from one database (i.e., Gbrowse presumes there
>> is one organisms in the database). Scott Cain mentioned to me a while back
>> that there are db_args need to be added to point at an individual species.
>> However, I can't seem to find any information on what db_args these would
>> be.
>>
>> Todd Moughamer
>> Manager, Analytical Solutions
>> Integrated Genome Biology
>>
>> Syngenta Biotechnology, Inc.
>>
>> 3054 Cornwallis Road, 1243.E
>>
>> Research Triangle Park, NC 27709-2257
>>
>> Tel: 919-597-3078
>>
>> Email: todd.moughamer at syngenta.com
>> www.syngenta.com
>>
>
>
>
> --
> ------------------------------------------------------------------------
> Scott Cain, Ph. D. cain.cshl at gmail.com
> GMOD Coordinator (http://www.gmod.org/) 216-392-3087
> Cold Spring Harbor Laboratory
>



-- 
------------------------------------------------------------------------
Scott Cain, Ph. D. cain.cshl at gmail.com
GMOD Coordinator (http://www.gmod.org/) 216-392-3087
Cold Spring Harbor Laboratory