[Gmod-help] How to add a histogram microarray expression data

Dave Clements, GMOD Help Desk gmodhelp at googlemail.com
Sun Jul 20 23:23:21 EDT 2008


Tony,

http://www.wormbase.org/db/seq/gbrowse/briggsae/?help=annotation#numeric

describes how to show a microarray intensity historgram in GBrowse.  Is this
what you are looking for?

You can also show microarray intensity with wiggle tracks.  See

http://gmod.org/wiki/index.php/GBrowse_Configuration_HOWTO#Quantitative_Data

Please let me know if this is not what you are looking for, or if you have
further questions.

Regards,

Dave Clements
GMOD HELP Desk

On Fri, Jul 18, 2008 at 3:38 AM, tony KAOMA MUKENDI <
tkaomamuken at jouy.inra.fr> wrote:

> Dear all,
>
> Can you help me please?
>
> I would like to add a graphic like histogram to represent microarray
> expression data. I don't know what kinde of plugin use.
> My data are store in data base Chado model. Using a  plugin annotaror and a
> Gbrowse's track, I can load expression data during a Gbrowse's search but
> I don't know what I cant do for draw a histogram and add it to Gbrowse's
> detail panel.
>
> Best Regards
>
> Tony KAOMA
>



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