<div dir="ltr"><div>Dear Soham,<br><br>At the moment, you may only download the complete genome sequence for those four Oryza spp from our FTP, see<br><br><a href="ftp://ftp.gramene.org/pub/gramene/CURRENT_RELEASE/data/fasta/">ftp://ftp.gramene.org/pub/gramene/CURRENT_RELEASE/data/fasta/</a><br>
<br>In the next day or so, you should be able to get the sequences for five additional Oryza genomes (O. barthii, O. punctata, O. meridionalis, O. glumaepatula and O. nivara) from our close collaborator's FTP site at <a href="ftp://ftp.ensemblgenomes.org/pub/plants/release-21/fasta/">ftp://ftp.ensemblgenomes.org/pub/plants/release-21/fasta/</a><span style="border-collapse:collapse;color:rgb(34,34,34);font-family:arial,sans-serif;font-size:13px"><br>
<br>As for the remaining Oryza species, we only have partial chr3s sequences and have not put those up for bulk download.<br><br>Hope this helps,<br><br></span></div><span style="border-collapse:collapse;color:rgb(34,34,34);font-family:arial,sans-serif;font-size:13px">Marcela<br>
</span><div><div class="gmail_extra">
<br><br><div class="gmail_quote">On Thu, Apr 3, 2014 at 9:43 PM, van Buren, Peter <span dir="ltr"><<a href="mailto:vanburen@cshl.edu" target="_blank">vanburen@cshl.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
This was sent to the gramene list. Looks like ftp for some sequences is missing?<br>
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<br>
<br>
Dear Sir/Madam,<br>
<br>
I want to download the whole genome sequences O. barthii, O. glumipetala,<br>
O. longistaminata, O. meridonalis, O. nivara, O. rufipogon, O. punctata, O.<br>
officinalis, and O. granulata for my research purpose. The links for<br>
downloading the genomes are provided in your database but while trying to<br>
download, I am unable to do so.<br>
For your kind information I was able to download the genomes of O.sativa<br>
japonica, O.sativa indica, O. glaberrima and O. brachyantha from your<br>
database but the same steps are not working for the above mentioned<br>
genomes. I am getting an error message '550 Failed to change directory'<br>
when I am clicking to the hyperlink 'download DNA sequence (FASTA)'.<br>
Please suggest me how to overcome this problem.Thank you<br>
<br>
<br>
--<br>
Soham Ray,<br>
Scientist (Biotechnology),<br>
Division of Crop Improvement,<br>
Central Rice Research institute (CRRI),<br>
Cuttack, Odisha - 753006<br>
<a href="mailto:sohamray27@gmail.com">sohamray27@gmail.com</a><mailto:<a href="mailto:sohamray27@gmail.com">sohamray27@gmail.com</a>><br>
<br>
--<br>
Peter Van Buren<br>
Systems Administrator<br>
Cold Spring Harbor Laboratories<br>
<a href="tel:516-367-8893" value="+15163678893">516-367-8893</a><br>
<a href="mailto:vanburen@cshl.edu">vanburen@cshl.edu</a><mailto:<a href="mailto:vanburen@cshl.edu">vanburen@cshl.edu</a>><br>
<br>
</blockquote></div><br></div></div></div>