<div dir="ltr"><div><div>Hi Anil<br><br></div>Sorry, I'm not familiar with RGAP format? Would those be Oryza sativa japonica gene models from IRGSP, MSU or RAP-DB? Or are those specific Os indica gene models? Is there a project website where I could take a look at this data? Thanks,<br>
<br></div>Marcela<br></div><div class="gmail_extra"><br clear="all"><div><span style="border-collapse:collapse;color:rgb(34,34,34);font-family:arial,sans-serif;font-size:13px"><font size="1">==<br>Marcela Karey Monaco, PhD</font> <font size="1"><br>
Gramene Project Coordinator<br>Cold Spring Harbor Laboratory<br>One Bungtown Road, Williams #5<br>Cold Spring Harbor, NY 11724<br></font></span><span style="border-collapse:collapse;color:rgb(34,34,34);font-family:arial,sans-serif;font-size:13px"><font size="1">Phone: <a value="+15163676998" style="color:rgb(17,85,204)"><span>516</span>-<span>367</span>-<span><span style="background-image:initial;background-color:rgb(255,255,204);color:rgb(34,34,34);background-repeat:initial initial"><span><font size="1">8808</font></span></span></span></a><a value="+15163676998" style="color:rgb(17,85,204)"><span></span></a><br>
Fax: <a value="+15163676851" style="color:rgb(17,85,204)"><span>516</span>-<span>367</span>-6851</a></font></span></div>
<br><br><div class="gmail_quote">On Tue, Feb 4, 2014 at 10:10 PM, <a href="mailto:anikng@gmail.com">anikng@gmail.com</a> <span dir="ltr"><<a href="mailto:anikng@gmail.com" target="_blank">anikng@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Anil kumar N.C (<a href="mailto:anikng@gmail.com">anikng@gmail.com</a>) sent a message using the contact form at<br>
<a href="http://www.gramene.org/contact" target="_blank">http://www.gramene.org/contact</a>.<br>
<br>
Dear Professor,<br>
<br>
Recently I have analyzed a set of RNASeq data using BGI annotation file<br>
(.gff3). Now I would like to convert the sequence IDs from BGI to RGAP<br>
format. I found that Gramene database provide that option. Since I need a<br>
bulk IDs to be converted, it is difficult to query each ID manually. So I<br>
request you to kindly provide me BGI to RGAP ID mapping file.<br>
<br>
Thanks,<br>
Anil Kumar N.C<br>
PhD student<br>
Kyung Hee University<br>
Korea<br>
<br>
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</blockquote></div><br></div>