[Feedback] Site Feedback: At gene At4g21370 is not in Gramene

feedback at gramene.org feedback at gramene.org
Tue Mar 26 13:49:57 EDT 2019


URL         : http://ensembl.gramene.org/Arabidopsis_thaliana/Gene/Summary?g=AT3G52430;r=3:19431095-19434450;t=AT3G52430.1

Subject     : At gene At4g21370 is not in Gramene

Name        : SUSHMA NAITHANI

Email       : sushma.naithani at gmail.com

Organization: Oregon State University

Comments    : Hi,
I do not find an Arabidopsis thaliana gene in Gramene  At4g21370. This gene is present in TAIR (https://www.arabidopsis.org/servlets/TairObject?id=130247&type=locus) and is known to transcribe. Although, it has a frameshift mutation and is considered as a pseudogene. Is gramene filtering all pseudogenes?. Having this gene in gramene could help analyzing other plant species that show selfing. I am interested in searching for its homologs in gramene. 


http://www.warelab.org/bugs/view.php?id=5809


More information about the Feedback mailing list