[Feedback] Site Feedback: Zm00001d051422_T001 annotation

feedback at gramene.org feedback at gramene.org
Fri Jul 14 16:35:52 EDT 2017


URL         : http://ensembl.gramene.org/Zea_mays/Transcript/ProteinSummary?db=core;g=Zm00001d051422;r=4:158027318-158027632;t=Zm00001d051422_T001

Subject     : Zm00001d051422_T001 annotation

Name        : Christine Chase

Email       : cdchase at ufl.edu

Organization: University of Florida

Comments    : Greetings. I've been working on a manuscript that investigates gene Zm00001d051422 among others and I'm caught in a version 3/4 hiccup. The version 4 transcript model includes zero 5' or 3' untranslated sequence so I think it must be wrong. Meanwhile, the version 3 model can no longer be coughed up by any browser I've tried, so using it in the manuscript is a bit problematic. But based on our RT-PCR v3 appears to be correct. Any chance of a re-annotation for the v4 transcript model in the near future? Thanks.

http://www.warelab.org/bugs/view.php?id=5658


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