[Feedback] Site Feedback: biomart link not working from dev site

feedback at gramene.org feedback at gramene.org
Wed Apr 26 15:19:55 EDT 2017


URL         : http://dev.gramene.org/genome_browser/index.html

Subject     : Site Feedback: biomart link not working from dev site

Name        : Marcela

Email       : mmonaco at cshl.edu

Organization: CSHL

Comments    : 

ERROR: caught BioMart::Exception: non-BioMart die(): Uncaught exception 'WebException' with message 'Apache2::RequestRec object is needed to set or access cookies.'
Thrown by EnsEMBL::Web::Cookie::new_from_header in module EnsEMBL::Web::Hub at /usr/local/ensembl-live/ensembl-webcode/modules/EnsEMBL/Web/Hub.pm on line 133
Called by EnsEMBL::Web::Hub::init_cookies in module EnsEMBL::Web::Hub at /usr/local/ensembl-live/ensembl-webcode/modules/EnsEMBL/Web/Hub.pm on line 114
Called by EnsEMBL::Web::Hub::new in module EnsEMBL::Web::Hub at /usr/local/ensembl-live/eg-web-common/modules/EnsEMBL/Web/Hub.pm on line 29
Called by EnsEMBL::Web::Hub::new in module EnsEMBL::Web::Controller at /usr/local/ensembl-live/ensembl-webcode/modules/EnsEMBL/Web/Controller.pm on line 97
Called by EnsEMBL::Web::Controller::new in module BioMart::Web::Controller at /usr/local/ensembl-live/public-plugins/mart/modules/BioMart/Web/Controller.pm on line 33
Called by BioMart::Web::Controller::new in module BioMart::Web::PageStub at /usr/local/ensembl-live/public-plugins/mart/modules/BioMart/Web/PageStub.pm on line 41
Called by BioMart::Web::PageStub::new in module BioMart::Web at /usr/local/ensembl-live/biomart-perl/lib/BioMart/Web.pm on line 2550
Called by BioMart::Web::handle_request in module ModPerl::ROOT::ModPerl::Registry::usr_local_ensembl_2dlive_ensembl_2dwebcode_biomart_2dperl_cgi_2dbin_martview at /usr/local/ensembl-live/ensembl-webcode/biomart-perl/cgi-bin/martview on line 100
Called by (eval) in module ModPerl::ROOT::ModPerl::Registry::usr_local_ensembl_2dlive_ensembl_2dwebcode_biomart_2dperl_cgi_2dbin_martview at /usr/local/ensembl-live/ensembl-webcode/biomart-perl/cgi-bin/martview on line 99
Called by ModPerl::ROOT::ModPerl::Registry::usr_local_ensembl_2dlive_ensembl_2dwebcode_biomart_2dperl_cgi_2dbin_martview::handler in module ModPerl::RegistryCooker at /usr/local/lib/perl5/site_perl/5.16.1/x86_64-linux/ModPerl/RegistryCooker.pm on line 206
Called by (eval) in module ModPerl::RegistryCooker at /usr/local/lib/perl5/site_perl/5.16.1/x86_64-linux/ModPerl/RegistryCooker.pm on line 206
Called by ModPerl::RegistryCooker::run in module ModPerl::RegistryCooker at /usr/local/lib/perl5/site_perl/5.16.1/x86_64-linux/ModPerl/RegistryCooker.pm on line 172
Called by ModPerl::RegistryCooker::default_handler in module ModPerl::Registry at /usr/local/lib/perl5/site_perl/5.16.1/x86_64-linux/ModPerl/Registry.pm on line 31
Called by ModPerl::Registry::handler in module main at -e on line 0
Called by (eval) in module main at -e on line 0

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Stacktrace:
Exception::Class::Base::new /usr/local/ensembl-live/ensembl-webcode/biomart-perl/cgi-bin/martview:105
ModPerl::ROOT::ModPerl::Registry::usr_local_ensembl_2dlive_ensembl_2dwebcode_biomart_2dperl_cgi_2dbin_martview::handler /usr/local/lib/perl5/site_perl/5.16.1/x86_64-linux/ModPerl/RegistryCooker.pm:206
(eval) /usr/local/lib/perl5/site_perl/5.16.1/x86_64-linux/ModPerl/RegistryCooker.pm:206
ModPerl::RegistryCooker::run /usr/local/lib/perl5/site_perl/5.16.1/x86_64-linux/ModPerl/RegistryCooker.pm:172
ModPerl::RegistryCooker::default_handler /usr/local/lib/perl5/site_perl/5.16.1/x86_64-linux/ModPerl/Registry.pm:31
ModPerl::Registry::handler -e:0
(eval) -e:0

http://www.warelab.org/bugs/view.php?id=5590




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