[Feedback] Site Feedback: assembly converter zea mays V4 to V2
feedback at gramene.org
feedback at gramene.org
Fri Apr 21 11:59:05 EDT 2017
URL : http://ensembl.gramene.org/Zea_mays/Tools/AssemblyConverter/View?db=core;tl=ifLydrFRGi6wXEcG-147760
Subject : Site Feedback: assembly converter zea mays V4 to V2
Name : Pierre Montalent
Email : pierre.montalent at inra.fr
Organization: INRA (French national agronomical Institute)
Comments :
Dear colleague,
I have met a problem with your assembly converter :
I try to convert V4 to V2 :
First I select AGPV4 -> AGPV2
Then, i write in the field "Either paste data" :
chr1 35000 35800
And It fails with the following message :
"Error: Uncaught exception 'HiveException' with message 'Output file empty (zero bytes).' Thrown by EnsEMBL::Web::RunnableDB::AssemblyConverter::run in module Bio::EnsEMBL::Hive::Process at /usr/local/ensembl-86/ensembl-hive/modules/Bio/EnsEMBL/Hive/Process.pm on line 140 Called by (eval) in module Bio::EnsEMBL::Hive::Process at /usr/local/ensembl-86/ensembl-hive/modules/Bio/EnsEMBL/Hive/Process.pm on line 127 Called by Bio::EnsEMBL::Hive::Process::life_cycle in module Bio::EnsEMBL::Hive::Worker at /usr/local/ensembl-86/ensembl-hive/modules/Bio/EnsEMBL/Hive/Worker.pm on line 688 Called by (eval) in module Bio::EnsEMBL::Hive::Worker at /usr/local/ensembl-86/ensembl-hive/modules/Bio/EnsEMBL/Hive/Worker.pm on line 674 Called by Bio::EnsEMBL::Hive::Worker::run_one_batch in module Bio::EnsEMBL::Hive::Worker at /usr/local/ensembl-86/ensembl-hive/modules/Bio/EnsEMBL/Hive/Worker.pm on line 526 Called by Bio::EnsEMBL::Hive::Worker::run in module Bio::EnsEMBL::Hive::Scripts::RunWorker at /usr/local/ensembl-86/ensembl-hive/modules/Bio/EnsEMBL/Hive/Scripts/RunWorker.pm on line 85 Called by (eval) in module Bio::EnsEMBL::Hive::Scripts::RunWorker at /usr/local/ensembl-86/ensembl-hive/modules/Bio/EnsEMBL/Hive/Scripts/RunWorker.pm on line 94 Called by Bio::EnsEMBL::Hive::Scripts::RunWorker::runWorker in module main at /usr/local/ensembl-86/ensembl-hive/scripts/runWorker.pl on line 135 Called by main::main in module main at /usr/local/ensembl-86/ensembl-hive/scripts/runWorker.pl on line 23
"
Do you have an idea on what's happened ?
Best regards
http://www.warelab.org/bugs/view.php?id=5587
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