[Feedback] Site Feedback: Biomart - using GRMZM Gene IDs for Zea mays

feedback at gramene.org feedback at gramene.org
Thu Oct 20 10:06:14 EDT 2016


URL         : http://ensembl.gramene.org/biomart/martview/9119f96b562bf63479e9dd2d542e30c9/9119f96b562bf63479e9dd2d542e30c9

Subject     : Site Feedback: Biomart - using GRMZM Gene IDs for Zea mays

Name        : Matt Heatley

Email       : stxmh23 at nottingham.ac.uk

Organization: University of Nottingham

Comments    : 

Hi,

I have a list of genes (~140) that I wish to search for the homologs in arabidopsis. Unfortunately I only have the old synonyms (i.e. GRMZM IDs) but Biomart seems to only accept the new MAKER IDs (one example is GRMZM2G120408 for which the MAKER ID is Zm00001d016066).

Is there a way to search using the old GRMZM IDs or a way to convert them to the new MAKER IDs?

Kind regards,

Matt

http://www.warelab.org/bugs/view.php?id=5489




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