[Feedback] Site Feedback: Issue with B73 V3 to V4 coordinate conversion

[feedback at gramene.org]

URL         : http://ensembl.gramene.org/Zea_mays/Tools/AssemblyConverter?db=core

Subject     : Site Feedback: Issue with B73 V3 to V4 coordinate conversion

Name        : Felix Francis

Email       : ffrancis at udel.edu

Organization: University of Delaware

Comments    : 

When I use the following V3 coordinates as the input, the output seems to be incorrect. Please let me know how this can be fixed.

Thank you



Input (V3 coordinates)

10	228730	228730
10	228828	228828
10	228869	228869
10	228948	228948
10	228998	228998
10	229011	229011
10	229081	229081
10	229143	229143
10	229187	229187
10	229197	229197
10	229422	229422
10	229444	229444
10	229495	229495
10	229504	229504
10	229555	229555
10	229563	229563
10	229581	229581
10	229603	229603
10	229608	229608
10	229613	229613
10	229615	229615
10	229633	229633
10	229671	229671
10	229703	229703
10	229763	229763
10	229849	229849
10	229876	229876
10	229958	229958
10	230120	230120
10	230198	230198

Output (V4?)

4	109382363	109382363
4	109382266	109382266
4	109382229	109382229
4	109382157	109382157
4	109382112	109382112
4	109382100	109382100
4	109382038	109382038
4	109381980	109381980
4	109381939	109381939
4	109381929	109381929
4	109381723	109381723
4	109381704	109381704
4	109381654	109381654
4	109381646	109381646
4	109381577	109381577
4	109381556	109381556
4	109381551	109381551
4	109381546	109381546
4	109381544	109381544
4	109381527	109381527
4	109381490	109381490
4	109381458	109381458
4	109381405	109381405
4	109381322	109381322
4	109381295	109381295
4	109381213	109381213
4	109381051	109381051
4	109380973	109380973


http://www.warelab.org/bugs/view.php?id=5479