[Feedback] Site Feedback: Releases - differences

Sat Aug 20 07:10:09 EDT 2016

URL         : http://www.gramene.org/gramene-comparative-genomics

Subject     : Site Feedback: Releases - differences

Name        : Maciej Jonczyk

Email       : mjonczyk at biol.uw.edu.pl

Organization: University of Warsaw

Comments    : 

Dear Gramene Team,

what are the differences between genome releases?

I use maize genome v 3.23 and I wonder if I have to stick to this release when using annotation files as gff, vcf and so on (or 3.31 is still compatible or genome coordinates changed?).

Or only major version change (eg. agp v3 -> agp v4) require realigment of sequencing reads and reannotation of data?

Best Regards, Maciej Jonczyk

http://www.warelab.org/bugs/view.php?id=5454