[Feedback] Site Feedback: multiple blast queries

feedback at gramene.org feedback at gramene.org
Tue Aug 16 18:54:50 EDT 2016


URL         : http://ensembl.gramene.org/info/website/index.html

Subject     : Site Feedback: multiple blast queries

Name        : Paulo Zaini

Email       : paulo.zaini at gmail.com

Organization: University of Sao Paulo

Comments    : 

Dear sir/madam,
I would like to perform a blastp search against the Vitis vinifera genome. I have a multifasta greater than 30 sequences, which prevents me from doing it online, but no perl os scripting skills to work with the API.
Is there a way I can do this?
My basic question is to map IDs of the type 
GSVIVT01000001001
onto IDs of the type
VIT_14s0128g00010

Thank you

http://www.warelab.org/bugs/view.php?id=5447




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