[Feedback] Site Feedback: ZeaMays GFF3 download

[Marcela Karey Monaco]

Glad to know :-)



> On Apr 11, 2015, at 4:08 PM, Vishnu Ramasubramanian <vishnur at iastate.edu> wrote:
> 
> Hi,
> 
> Got the link to the Zea_mays.AGPv3.26.dna.genome.fa.gz through the FTP page. Kindly ignore the previous message.
> 
> thanks,
> Vishnu
> 
> On Sat, Apr 11, 2015 at 1:25 PM, Vishnu Ramasubramanian <vishnur at iastate.edu<mailto:vishnur at iastate.edu>> wrote:
> Hi Marcela,
> 
> Is version Zea_mays.AGPv3.26.gff3.gz compatible with Zea_mays.AGPv3.25.dna.genome.fa.gz build? Can you send the link to the most recent version of genome build that is compatible with the recent GFF3 file. I'm not able to access the download link for some reason through my browser. I want to use the genome build FASTA file and GFF3 file for RNA Seq analysis.
> 
> thanks,
> Vishnu
> 
> On Sat, Apr 11, 2015 at 3:16 AM, Marcela K. Monaco <mmonaco at cshl.edu<mailto:mmonaco at cshl.edu>> wrote:
> Dear Vishnu,
> 
> Is this the specific directory that you are looking at?
> 
> ftp://ftp.gramene.org/pub/gramene/release45/data/gff3/zea_mays/
> 
> If so, it works for me...
> 
> Marcela
> 
> On Sat, Apr 11, 2015 at 1:33 AM, feedback at gramene.org<mailto:feedback at gramene.org> <feedback at gramene.org<mailto:feedback at gramene.org>> wrote:
> URL         : http://www.gramene.org/ftp-download
> 
> Subject     : Site Feedback: ZeaMays GFF3 download
> 
> Name        : Vishnu
> 
> Email       : vishnur at iastate.edu<mailto:vishnur at iastate.edu>
> 
> Organization: Iowa State University
> 
> Comments    :
> 
> I'm not able to download ZeaMays gene model annotation file (GFF3) from the link provided. I get an error saying :
> '550 Failed to change directory.'
> 
> 
> http://www.warelab.org/bugs/view.php?id=5156
> 
> 
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