[Feedback] versions of B73 reference sequence
Marcela K. Monaco
mmonaco at cshl.edu
Tue Jun 10 12:21:39 EDT 2014
Dear Eva,
>From the NCBI records, looks like v3 is GCA_000005005.5 [
http://www.ncbi.nlm.nih.gov/assembly/GCA_000005005.5/]
and v3 is GCA_000005005.4 [
http://www.ncbi.nlm.nih.gov/assembly/GCA_000005005.4]
Also, here is the legacy FTP archive from maizesequence.org:
ftp://ftp.gramene.org/pub/gramene/maizesequence.org/
Marcela
==
Marcela Karey Monaco, PhD
Gramene Project Coordinator
Cold Spring Harbor Laboratory
One Bungtown Road, Williams #5
Cold Spring Harbor, NY 11724
Phone: 516-367-8808
Fax: 516-367-6851
On Tue, Jun 10, 2014 at 8:58 AM, Bauer, Eva <e.bauer at tum.de> wrote:
> Dear Gramene team,
>
> I am contacting you since the maizesequence.org site is discontinued.
> I would be interested to know whether the maize B73 genome version AGP_v2
> (5b) is equivalent to GenBank Assembly ID: GCA_000005005.4
>
> Thanks and best regards,
> Eva Bauer
>
>
> --
> Dr. Eva Bauer
> Technische Universität München
> Wissenschaftszentrum Weihenstephan
> Lehrstuhl für Pflanzenzüchtung (Plant Breeding)
> Liesel-Beckmann-Str. 2
> 85354 Freising
> Germany
> Tel.: xx49.8161.71-5243
> Fax: xx49.8161.71-4511
> http://www.plantbreeding.wzw.tum.de/
>
>
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